Skip to main content

Table 1 PCR mix and condition for HCMV molecular detection and genotyping by Semi-nested PCR

From: Congenital cytomegalovirus infection in newborns suspected of congenital rubella syndrome in Iran: a cross-sectional study

First round PCR mixture

Second round PCR mixture

Amplification

Temperature

Time

Component

Volume

Component

Volume

Pre-Denaturation

95◦C

5'

DDW

28 μl

DDW

33 μl

Denaturation

94◦C

1'

Buffer

5 μl

Buffer

5 μl

Annealing

55◦C

1'

Mgcl2

2 μl

Mgcl2

2 μl

Extension

72◦C

1'

dNTP

1.5 μl

dNTP

1.5 μl

Final extention

72◦C

8'

Forward Primer

1.5 μl

Forward Primer

1.5 μl

Hold

4◦C

-

Reverse 1 Primer

1.5 μl

Reverse 2 primer

1.5 μl

   

Taq DNA polymerase

0.5 μl

Taq DNA polymerase

0.5 μl

   

Total

50 μl

Total

50 μl