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Table 1 Summary of HIV-1 pol FP-DBS PCR assay performed on DBS spiked with low copy number ACH2 cells

From: Evaluation of a single round polymerase chain reaction assay using dried blood spots for diagnosis of HIV-1 infection in infants in an African setting

Cell count

Copies/ml

pol real-time copies/rx

(on ACH2 used to spike)

avg 3 tests

No. positive (%)

qualitative PCR

on DBS lysate

Avg % D1 or D2

Avg % both days

(D1 and D2)

10(A)D1

11.4

40(100)

98.7

98.1

10(B)D1

6.5

39(97.5)

  

10(A)D2

17.5

38(95)

97.5

 

10(B)D2

12.5

40(100)

  

5(A)D1

12.6

26(65)

72.5

 

5(B)D1

4.95

32(80)

 

72.5

5(A)D2

3.5

25(62.5)

72.5

 

5(B)D2

3.6

33(82.5)

  

2(A)D1

1.1

27(67.5)

75

46.9

2(B)D1

3.05

33(82.5)

  

2(A)D2

1.5

11(27.5)

18.8

 

2(B)D2

1.3

4(10)

  

1(A)D1

1.6

18 (45)

56.2

38.7

1(B)D1

0.8

27(67.5)

  

1(A)D2

0.1

9(22.5)

21.2

 

1(B)D2

3.3

8(20)

  
  1. A total of 40 HIV-1 pol PCR assays were performed on FP-DBS spiked in duplicate (A and B) with known copies of HIV-1 in ACH-2 cells (manually counted and quantified by HIV-1 pol real-time PCR assay done) on two different days (D1 and D2). The results of the HIV-1 pol PCR assay are indicated as an average percentage of HIV-1 proviral copies detected from the spiked FP-DBS.