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Table 1 Genomic findings and variant interpretation

From: Case report : a novel ASXL3 gene variant in a Sudanese boy

Gene

Genomic location

HGVS cDNA

HGVS protein

Zygosity

Parent of origin

Interpretation

ASXL3

Chr18:31322918 C>T(GRCh37)

c.3043C>T (NM_030632.3)

p.Q1015X

Het

De novo

Pathogenic (PVS1,PS2, PM2,PP4,PP5)

  1. Criteria: PVS1: null variant; PS2: de novo in a patient with disease and no family history; PM2: absent from controls; PP4: patient’s phenotype is highly specific for a disease with a single genetic etiology; PP5: reputable source recently reports the variant as likely pathogenic, but evidence was not available for us to perform an independent evaluation.