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Table 1 COL2A1 variants in the exome data of patient III-3

From: Recurrent c.G1636A (p.G546S) mutation of COL2A1 in a Chinese family with skeletal dysplasia and different metaphyseal changes: a case report

Variant

Nucleotide change

Protein change

aFunctional prediction by SIFT database

bFunctional prediction by PolyPhen2 database

cConservative alignment between species using HomoloGene database

rs140740708

c.2854G > T

p.P952T

Tolerated

Benign

Conserved

rs1635560

c.4317 + 43G > A

-

-

-

-

rs41272029

c.2673G > C

p.G891G

-

-

Highly conserved

  1. aSIFT database (http://sift.jcvi.org/)
  2. bPolyphen2 database (http://genetics.bwh.harvard.edu/pph2/)
  3. cHomoloGene database (http://www.ncbi.nlm.nih.gov/homologene)